Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent phosphogluconate dehydrogenase | E0E99_23940 | Not Available | Positive | 4793337 - 4794743 | 51454.1 |
| udp-glucose 6-dehydrogenase | E0E99_23945 | Not Available | Positive | 4794941 - 4796107 | 43528.9 |
| nad-dependent epimerase | E0E99_23950 | Not Available | Negative | 4796166 - 4797170 | 37493.7 |
| lps o-antigen chain length determinant protein wzzb | E0E99_23960 | Not Available | Positive | 4797569 - 4798552 | 36033.5 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | E0E99_23965 | Not Available | Negative | 4798608 - 4799219 | 22747.2 |
| imidazole glycerol phosphate synthase subunit hisf | E0E99_23970 | Not Available | Negative | 4799213 - 4799989 | 28484.0 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | E0E99_23975 | Not Available | Negative | 4799971 - 4800708 | 25971.0 |
| imidazole glycerol phosphate synthase subunit hish | E0E99_23980 | Not Available | Negative | 4800708 - 4801298 | 21631.1 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | E0E99_23985 | Not Available | Negative | 4801298 - 4802365 | 40277.4 |
| histidinol-phosphate transaminase | E0E99_23990 | Not Available | Negative | 4802362 - 4803441 | 39888.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

