Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cusa/czca family heavy metal efflux rnd transporter | E0E99_23835 | Not Available | Negative | 4759693 - 4762836 | 114616.0 |
| efflux rnd transporter periplasmic adaptor subunit | E0E99_23840 | Not Available | Negative | 4762848 - 4764140 | 47102.5 |
| copper-binding protein | E0E99_23845 | Not Available | Negative | 4764217 - 4764564 | 12775.5 |
| efflux transporter outer membrane subunit | E0E99_23850 | Not Available | Negative | 4764597 - 4765979 | 50691.9 |
| copper response regulator transcription factor cusr | E0E99_23855 | Not Available | Positive | 4766174 - 4766857 | 25398.1 |
| cu(+)/ag(+) sensor histidine kinase | E0E99_23860 | Not Available | Positive | 4766847 - 4768298 | 54706.3 |
| copper-binding protein | E0E99_23865 | Not Available | Positive | 4768424 - 4768750 | 11692.5 |
| hypothetical protein | E0E99_23870 | Not Available | Positive | 4769123 - 4769629 | 18792.6 |
| mbl fold metallo-hydrolase | E0E99_23875 | Not Available | Positive | 4769713 - 4770516 | 29334.4 |
| cytochrome c | E0E99_23885 | Not Available | Negative | 4773053 - 4774147 | 40457.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

