Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inovirus gp2 family protein | E0E99_23785 | Not Available | Positive | 4750173 - 4750805 | 24331.7 |
| duf3987 domain-containing protein | E0E99_23790 | Not Available | Negative | 4750941 - 4752380 | 54059.8 |
| alpa family phage regulatory protein | E0E99_23795 | Not Available | Negative | 4752473 - 4752688 | 8276.12 |
| hypothetical protein | E0E99_23800 | Not Available | Positive | 4752917 - 4754098 | 44983.9 |
| hypothetical protein | E0E99_23805 | Not Available | Negative | 4754408 - 4755163 | 28825.0 |
| pilus assembly protein pilz | E0E99_23810 | Not Available | Negative | 4755232 - 4755674 | 17040.5 |
| duf417 domain-containing protein | E0E99_23815 | Not Available | Negative | 4756252 - 4756812 | 20719.6 |
| duf1471 domain-containing protein | E0E99_23820 | Not Available | Negative | 4756824 - 4757060 | 8341.21 |
| pyridine nucleotide-disulfide oxidoreductase | E0E99_23825 | Not Available | Negative | 4757225 - 4758550 | 47849.3 |
| arac family transcriptional regulator | E0E99_23830 | Not Available | Positive | 4758787 - 4759641 | 31447.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

