Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0E99_23735 | Not Available | Negative | 4742989 - 4743909 | 34239.2 |
| hypothetical protein | E0E99_23740 | Not Available | Negative | 4743973 - 4744344 | 13800.6 |
| transmembrane anchor protein | E0E99_23745 | Not Available | Negative | 4744485 - 4745174 | 25027.8 |
| hupe/urej family protein | E0E99_23750 | Not Available | Negative | 4745188 - 4745925 | 27102.6 |
| hypothetical protein | E0E99_23755 | Not Available | Negative | 4745970 - 4746335 | 13578.2 |
| hypothetical protein | E0E99_23760 | Not Available | Negative | 4746679 - 4747041 | 13083.2 |
| hypothetical protein | E0E99_23765 | Not Available | Negative | 4747077 - 4747517 | 16003.6 |
| wyl domain-containing protein | E0E99_23770 | Not Available | Negative | 4747526 - 4748212 | 26931.4 |
| duf3944 domain-containing protein | E0E99_23775 | Not Available | Negative | 4748232 - 4748969 | 27230.2 |
| hypothetical protein | E0E99_23780 | Not Available | Negative | 4749111 - 4749689 | 19845.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

