Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin | E0E99_23685 | Not Available | Negative | 4736039 - 4736362 | 12144.6 |
| type iv toxin-antitoxin system yeeu family antitoxin | E0E99_23690 | Not Available | Negative | 4736394 - 4736717 | 12083.5 |
| duf987 domain-containing protein | E0E99_23695 | Not Available | Negative | 4736739 - 4736960 | 8415.06 |
| dna repair protein radc | E0E99_23700 | Not Available | Negative | 4736969 - 4737439 | 17949.7 |
| duf945 domain-containing protein | E0E99_23705 | Not Available | Negative | 4737472 - 4738293 | 31165.5 |
| nird/ygiw/ydei family stress tolerance protein | E0E99_23710 | Not Available | Negative | 4738514 - 4738942 | 15981.0 |
| nickel/cobalt efflux protein rcna | E0E99_23715 | Not Available | Negative | 4739115 - 4740257 | 42093.5 |
| metal-sensing transcriptional repressor | E0E99_23720 | Not Available | Negative | 4740270 - 4740539 | 10032.0 |
| mfs transporter | E0E99_23725 | Not Available | Negative | 4740643 - 4741941 | 46858.0 |
| tat pathway signal sequence | E0E99_23730 | Not Available | Negative | 4742177 - 4742935 | 28216.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

