Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp diphosphokinase | E0E99_23635 | Not Available | Negative | 4721733 - 4723967 | 84102.8 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | E0E99_23640 | Not Available | Negative | 4724068 - 4725366 | 48183.1 |
| two-component sensor histidine kinase bara | E0E99_23645 | Not Available | Positive | 4725424 - 4728180 | 102381.0 |
| glycerate kinase | E0E99_23650 | Not Available | Negative | 4728224 - 4729366 | 39383.0 |
| glucarate dehydratase | E0E99_23655 | Not Available | Negative | 4729448 - 4730788 | 49114.9 |
| glucarate dehydratase | E0E99_23660 | Not Available | Negative | 4730809 - 4732149 | 48710.1 |
| mfs transporter | E0E99_23665 | Not Available | Negative | 4732152 - 4733504 | 48928.6 |
| flavodoxin | E0E99_23670 | Not Available | Negative | 4733847 - 4734296 | 16320.1 |
| trna pseudouridine(65) synthase truc | E0E99_23675 | Not Available | Negative | 4734328 - 4735098 | 29345.2 |
| yqcc family protein | E0E99_23680 | Not Available | Negative | 4735098 - 4735427 | 12688.1 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

