Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine transporter tyrp | E0E99_23535 | Not Available | Positive | 4689600 - 4690811 | 42792.6 |
| yeca family protein | E0E99_23540 | Not Available | Negative | 4690838 - 4691503 | 25045.7 |
| heavy-metal-associated domain-containing protein | E0E99_23545 | Not Available | Negative | 4691713 - 4691994 | 10133.5 |
| hypothetical protein | E0E99_23550 | Not Available | Negative | 4691991 - 4692347 | 13468.0 |
| transglutaminase family protein | E0E99_23555 | Not Available | Negative | 4692325 - 4693467 | 41991.8 |
| patatin | E0E99_23560 | Not Available | Positive | 4693799 - 4694824 | 37088.5 |
| polyketide cyclase | E0E99_23565 | Not Available | Negative | 4694844 - 4695314 | 18013.4 |
| duf1571 domain-containing protein | E0E99_23570 | Not Available | Negative | 4695328 - 4696017 | 25263.4 |
| hypothetical protein | E0E99_23575 | Not Available | Positive | 4696222 - 4696566 | 12536.0 |
| is3 family transposase | E0E99_23580 | Not Available | Positive | 4697064 - 4698172 | 43475.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

