Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-arabinose abc transporter atp-binding protein arag | E0E99_23485 | Not Available | Negative | 4680629 - 4682143 | 55117.8 |
| arabinose abc transporter substrate-binding protein | E0E99_23490 | Not Available | Negative | 4682259 - 4683248 | 35369.7 |
| dj-1/pfpi family protein | E0E99_23495 | Not Available | Negative | 4683564 - 4684121 | 19943.0 |
| non-heme ferritin-like protein | E0E99_23500 | Not Available | Positive | 4684675 - 4685178 | 19053.7 |
| duf2766 domain-containing protein | E0E99_23505 | Not Available | Negative | 4685318 - 4685569 | 9102.04 |
| mfs transporter | E0E99_23510 | Not Available | Positive | 4685700 - 4687121 | 50495.3 |
| hypothetical protein | E0E99_23515 | Not Available | Negative | 4687155 - 4687793 | 23225.9 |
| hypothetical protein | E0E99_23520 | Not Available | Positive | 4688061 - 4688396 | 11875.3 |
| non-heme ferritin | E0E99_23525 | Not Available | Positive | 4688591 - 4689088 | 19291.7 |
| duf2492 family protein | E0E99_23530 | Not Available | Negative | 4689134 - 4689373 | 8618.17 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

