Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replication-associated recombination protein a | E0E99_01060 | Not Available | Negative | 223222 - 224565 | 49577.7 |
| outer membrane lipoprotein chaperone lola | E0E99_01065 | Not Available | Negative | 224576 - 225187 | 22629.4 |
| dna translocase ftsk | E0E99_01070 | Not Available | Negative | 225299 - 229285 | 146027.0 |
| leucine-responsive transcriptional regulator lrp | E0E99_01075 | Not Available | Negative | 229420 - 229914 | 18873.9 |
| thioredoxin-disulfide reductase | E0E99_01080 | Not Available | Positive | 230462 - 231430 | 34649.2 |
| cysteine/glutathione abc transporter permease/atp-binding protein cydd | E0E99_01085 | Not Available | Positive | 231545 - 233311 | 64953.0 |
| cysteine/glutathione abc transporter atp-binding protein/permease cydc | E0E99_01090 | Not Available | Positive | 233312 - 235033 | 62581.7 |
| leucyl/phenylalanyl-trna--protein transferase | E0E99_01095 | Not Available | Positive | 235078 - 235782 | 26678.0 |
| translation initiation factor if-1 | E0E99_01105 | Not Available | Positive | 236068 - 236286 | 8236.07 |
| lysr family transcriptional regulator | E0E99_01110 | Not Available | Negative | 236366 - 237277 | 33815.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

