Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructuronate reductase | E0E99_23435 | Not Available | Positive | 4670428 - 4671894 | 53849.8 |
| putative selenium delivery protein ydfz | E0E99_23440 | Not Available | Negative | 4671970 - 4672173 | 7373.9 |
| gntr family transcriptional regulator | E0E99_23445 | Not Available | Negative | 4672365 - 4673051 | 26469.7 |
| bifunctional nadp-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase ydfg | E0E99_23450 | Not Available | Negative | 4673138 - 4673884 | 27262.5 |
| peptidyl-dipeptidase dcp | E0E99_23455 | Not Available | Positive | 4674022 - 4676067 | 77353.3 |
| hypothetical protein | E0E99_23460 | Not Available | Positive | 4676356 - 4676574 | 8283.14 |
| universal stress protein uspc | E0E99_23465 | Not Available | Positive | 4676807 - 4677235 | 15863.9 |
| alpha,alpha-trehalose-phosphate synthase | E0E99_23470 | Not Available | Negative | 4677253 - 4678674 | 53482.9 |
| trehalose-phosphatase | E0E99_23475 | Not Available | Negative | 4678649 - 4679452 | 29099.8 |
| l-arabinose abc transporter permease arah | E0E99_23480 | Not Available | Negative | 4679628 - 4680614 | 34367.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

