Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tat proofreading chaperone dmsd | E0E99_23380 | Not Available | Negative | 4660284 - 4660898 | 23321.5 |
| dimethylsulfoxide reductase | E0E99_23385 | Not Available | Negative | 4660941 - 4661795 | 30372.2 |
| dimethylsulfoxide reductase subunit b | E0E99_23390 | Not Available | Negative | 4661797 - 4662414 | 22634.8 |
| duf1161 domain-containing protein | E0E99_23400 | Not Available | Negative | 4665001 - 4665309 | 10752.7 |
| ynfc family lipoprotein | E0E99_23405 | Not Available | Positive | 4665412 - 4666122 | 26273.1 |
| spermidine n1-acetyltransferase | E0E99_23410 | Not Available | Negative | 4666130 - 4666690 | 21843.2 |
| duf1283 family protein | E0E99_23415 | Not Available | Negative | 4666726 - 4667067 | 12860.2 |
| ynfa family protein | E0E99_23420 | Not Available | Positive | 4667221 - 4667547 | 11835.0 |
| starvation-sensing protein rspa | E0E99_23425 | Not Available | Positive | 4667655 - 4668869 | 45883.9 |
| mfs transporter | E0E99_23430 | Not Available | Positive | 4668930 - 4670264 | 48501.8 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

