Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-aminobutyrate transaminase | E0E99_23330 | Not Available | Negative | 4647777 - 4649039 | 44680.7 |
| plp-dependent aminotransferase family protein | E0E99_23335 | Not Available | Positive | 4649146 - 4650621 | 54962.2 |
| c-type cytochrome | E0E99_23340 | Not Available | Negative | 4650665 - 4651873 | 43205.7 |
| nad(p)/fad-dependent oxidoreductase | E0E99_23345 | Not Available | Negative | 4651877 - 4653769 | 70096.3 |
| polyketide cyclase | E0E99_23350 | Not Available | Negative | 4653858 - 4654331 | 17403.5 |
| gamma-aminobutyraldehyde dehydrogenase | E0E99_23355 | Not Available | Negative | 4654343 - 4655770 | 51215.7 |
| lysr family transcriptional regulator | E0E99_23360 | Not Available | Positive | 4655851 - 4656759 | 33655.1 |
| rok family transcriptional regulator | E0E99_23365 | Not Available | Positive | 4656878 - 4658098 | 44163.7 |
| atp-dependent dethiobiotin synthetase biod | E0E99_23370 | Not Available | Positive | 4658224 - 4658919 | 24688.0 |
| voltage-gated clc-type chloride channel clcb | E0E99_23375 | Not Available | Negative | 4658875 - 4660164 | 45341.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

