Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | E0E99_23270 | Not Available | Positive | 4637460 - 4638440 | 36551.0 |
| type i glyceraldehyde-3-phosphate dehydrogenase | E0E99_23275 | Not Available | Positive | 4638519 - 4639529 | 36070.0 |
| hypothetical protein | E0E99_23285 | Not Available | Negative | 4640174 - 4640356 | 6865.38 |
| Trna-val | Not Available | Not Available | Positive | 4640419 - 4640495 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 4640500 - 4640576 | Not Available |
| abc transporter atp-binding protein | E0E99_23305 | Not Available | Negative | 4641457 - 4642209 | 27179.0 |
| iron abc transporter permease | E0E99_23310 | Not Available | Negative | 4642206 - 4643210 | 35814.1 |
| hypothetical protein | E0E99_23315 | Not Available | Negative | 4643197 - 4644252 | 39234.3 |
| abc transporter substrate-binding protein | E0E99_23320 | Not Available | Negative | 4644411 - 4645421 | 37183.4 |
| tonb-dependent siderophore receptor | E0E99_23325 | Not Available | Negative | 4645431 - 4647563 | 77436.8 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

