Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2627 domain-containing protein | E0E99_23220 | Not Available | Positive | 4627939 - 4628082 | 5238.46 |
| cold shock-like protein cspc | E0E99_23225 | Not Available | Positive | 4628095 - 4628304 | 7402.76 |
| peptidoglycan glycosyltransferase ftsi | E0E99_23230 | Not Available | Positive | 4628524 - 4630269 | 63044.7 |
| 23s rrna (guanine(745)-n(1))-methyltransferase | E0E99_23235 | Not Available | Positive | 4630333 - 4631142 | 29891.8 |
| manganese efflux pump mntp | E0E99_23240 | Not Available | Negative | 4631139 - 4631705 | 20131.3 |
| duf1120 domain-containing protein | E0E99_23245 | Not Available | Positive | 4632008 - 4632712 | 24750.3 |
| fimbrial chaperone protein | E0E99_23250 | Not Available | Positive | 4632812 - 4633516 | 26231.1 |
| fimbrial assembly protein | E0E99_23255 | Not Available | Positive | 4633638 - 4636052 | 88339.5 |
| hypothetical protein | E0E99_23260 | Not Available | Positive | 4636049 - 4636600 | 20788.7 |
| duf1120 domain-containing protein | E0E99_23265 | Not Available | Positive | 4636746 - 4637387 | 22834.1 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

