Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0E99_23120 | Not Available | Negative | 4609830 - 4610009 | 6675.07 |
| giy-yig nuclease family protein | E0E99_23125 | Not Available | Positive | 4610245 - 4610712 | 17929.2 |
| hypothetical protein | E0E99_23130 | Not Available | Positive | 4610788 - 4611111 | 12264.9 |
| sos response-associated peptidase | E0E99_23135 | Not Available | Negative | 4611462 - 4612133 | 25076.7 |
| hypothetical protein | E0E99_23140 | Not Available | Negative | 4612246 - 4612344 | 3800.5 |
| protein-serine/threonine phosphatase | E0E99_23145 | Not Available | Positive | 4612685 - 4613326 | 24891.9 |
| duf1482 family protein | E0E99_23150 | Not Available | Negative | 4613327 - 4613518 | 7290.54 |
| duf1480 family protein | E0E99_23155 | Not Available | Negative | 4613621 - 4613860 | 8891.49 |
| 16s rrna (cytosine(1407)-c(5))-methyltransferase rsmf | E0E99_23160 | Not Available | Negative | 4613958 - 4615379 | 52669.7 |
| pqib family protein | E0E99_23165 | Not Available | Negative | 4615459 - 4618092 | 94812.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

