Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-serine ammonia-lyase | E0E99_23065 | Not Available | Positive | 4599570 - 4600934 | 48774.5 |
| eal domain-containing protein | E0E99_23070 | Not Available | Positive | 4601065 - 4602666 | 59882.9 |
| terc family protein | E0E99_23075 | Not Available | Negative | 4602673 - 4604232 | 56539.7 |
| pts mannose transporter subunit iiab | E0E99_23080 | Not Available | Positive | 4604692 - 4605654 | 34822.2 |
| pts mannose/fructose/sorbose transporter subunit iic | E0E99_23085 | Not Available | Positive | 4605713 - 4606513 | 27510.4 |
| pts mannose transporter subunit iid | E0E99_23090 | Not Available | Positive | 4606526 - 4607377 | 30872.4 |
| duf986 domain-containing protein | E0E99_23095 | Not Available | Positive | 4607438 - 4607896 | 17826.4 |
| dini family protein | E0E99_23100 | Not Available | Negative | 4608068 - 4608310 | 9279.23 |
| lexa family transcriptional regulator | E0E99_23110 | Not Available | Positive | 4608631 - 4609020 | 14286.0 |
| hypothetical protein | E0E99_23115 | Not Available | Negative | 4609316 - 4609729 | 16016.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

