Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate transporter foca | E0E99_01010 | Not Available | Positive | 209589 - 210446 | 30847.4 |
| formate c-acetyltransferase | E0E99_01015 | Not Available | Positive | 210506 - 212788 | 85014.4 |
| pyruvate formate lyase-activating protein | E0E99_01020 | Not Available | Positive | 212974 - 213714 | 28280.9 |
| amino acid permease | E0E99_01025 | Not Available | Negative | 213758 - 215179 | 52284.4 |
| mfs transporter | E0E99_01030 | Not Available | Negative | 215393 - 216541 | 41525.4 |
| hydrolase | E0E99_01035 | Not Available | Positive | 216927 - 217553 | 23075.5 |
| dimethyl sulfoxide reductase anchor subunit | E0E99_01040 | Not Available | Negative | 217663 - 218526 | 31034.4 |
| dimethylsulfoxide reductase subunit b | E0E99_01045 | Not Available | Negative | 218528 - 219145 | 22668.9 |
| dimethylsulfoxide reductase subunit a | E0E99_01050 | Not Available | Negative | 219156 - 221600 | 90499.8 |
| serine--trna ligase | E0E99_01055 | Not Available | Negative | 221837 - 223129 | 48502.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

