Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal recognition particle protein | E0E99_22750 | Not Available | Positive | 4542699 - 4544060 | 49746.4 |
| 30s ribosomal protein s16 | E0E99_22755 | Not Available | Positive | 4544314 - 4544562 | 9165.04 |
| ribosome maturation factor rimm | E0E99_22760 | Not Available | Positive | 4544581 - 4545129 | 20473.4 |
| trna (guanosine(37)-n1)-methyltransferase trmd | E0E99_22765 | Not Available | Positive | 4545174 - 4545941 | 28465.1 |
| 50s ribosomal protein l19 | E0E99_22770 | Not Available | Positive | 4545981 - 4546328 | 13134.0 |
| ompa family protein | E0E99_22775 | Not Available | Negative | 4546460 - 4546942 | 17509.9 |
| diguanylate cyclase dgcn | E0E99_22780 | Not Available | Negative | 4546955 - 4548181 | 45984.2 |
| yfir family protein | E0E99_22785 | Not Available | Negative | 4548174 - 4548692 | 19047.2 |
| duf2799 domain-containing protein | E0E99_22790 | Not Available | Negative | 4548851 - 4549225 | 13884.2 |
| 3-deoxy-7-phosphoheptulonate synthase arof | E0E99_22795 | Not Available | Positive | 4549440 - 4550510 | 38893.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

