Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssra-binding protein smpb | E0E99_22695 | Not Available | Negative | 4535138 - 4535620 | 18184.0 |
| type ii toxin-antitoxin system rata family toxin | E0E99_22700 | Not Available | Positive | 4535763 - 4536218 | 16856.5 |
| rnfh family protein | E0E99_22705 | Not Available | Positive | 4536202 - 4536498 | 11017.4 |
| outer membrane protein assembly factor bame | E0E99_22710 | Not Available | Negative | 4536549 - 4536893 | 12506.0 |
| dna repair protein recn | E0E99_22715 | Not Available | Negative | 4537043 - 4538704 | 61408.2 |
| nad(+) kinase | E0E99_22720 | Not Available | Negative | 4538790 - 4539668 | 32552.3 |
| molecular chaperone grpe | E0E99_22725 | Not Available | Positive | 4539600 - 4539794 | 7192.82 |
| nucleotide exchange factor grpe | E0E99_22730 | Not Available | Positive | 4539791 - 4540384 | 21745.9 |
| duf21 domain-containing protein | E0E99_22735 | Not Available | Negative | 4540434 - 4541723 | 48104.1 |
| inner membrane protein ypjd | E0E99_22740 | Not Available | Negative | 4541742 - 4542533 | 29202.8 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

