Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombination-associated protein rdgc | E0E99_22645 | Not Available | Positive | 4526999 - 4527982 | 36731.4 |
| hypothetical protein | E0E99_22650 | Not Available | Positive | 4527994 - 4528872 | 33315.3 |
| hypothetical protein | E0E99_22655 | Not Available | Positive | 4528986 - 4529471 | 17920.0 |
| hnh endonuclease | E0E99_22660 | Not Available | Positive | 4529490 - 4529918 | 16225.8 |
| hypothetical protein | E0E99_22665 | Not Available | Positive | 4530016 - 4530498 | 18097.5 |
| hypothetical protein | E0E99_22670 | Not Available | Positive | 4530608 - 4530928 | 11518.0 |
| hypothetical protein | E0E99_22675 | Not Available | Positive | 4530980 - 4531564 | 22007.1 |
| duf4942 domain-containing protein | E0E99_22680 | Not Available | Positive | 4531756 - 4533465 | 64498.7 |
| hypothetical protein | E0E99_22685 | Not Available | Positive | 4533619 - 4534374 | 28061.5 |
| hypothetical protein | E0E99_22690 | Not Available | Positive | 4534389 - 4534781 | 14081.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

