Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavodoxin family protein | E0E99_22440 | Not Available | Positive | 4498822 - 4499403 | 21742.9 |
| antibiotic biosynthesis monooxygenase | E0E99_22445 | Not Available | Positive | 4499434 - 4499748 | 11513.9 |
| dna topoisomerase iv subunit b | E0E99_22450 | Not Available | Negative | 4499856 - 4501748 | 70148.6 |
| esterase yqia | E0E99_22455 | Not Available | Negative | 4501777 - 4502358 | 21707.9 |
| 3',5'-cyclic-amp phosphodiesterase | E0E99_22460 | Not Available | Negative | 4502358 - 4503185 | 30969.6 |
| duf1249 family protein | E0E99_22465 | Not Available | Negative | 4503210 - 4503632 | 16485.7 |
| adp-ribose diphosphatase | E0E99_22470 | Not Available | Negative | 4503629 - 4504261 | 23908.4 |
| outer membrane channel protein tolc | E0E99_22475 | Not Available | Positive | 4504467 - 4505951 | 53598.4 |
| duf1190 family protein | E0E99_22480 | Not Available | Positive | 4506109 - 4506786 | 23547.8 |
| glutathionylspermidine synthase family protein | E0E99_22485 | Not Available | Positive | 4506792 - 4507952 | 44992.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

