Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1488 domain-containing protein | E0E99_22165 | Not Available | Positive | 4432799 - 4433056 | 9875.57 |
| gamma carbonic anhydrase family protein | E0E99_22170 | Not Available | Negative | 4433032 - 4433586 | 20037.1 |
| hypothetical protein | E0E99_22175 | Not Available | Positive | 4433614 - 4433826 | 8082.26 |
| propanediol/glycerol family dehydratase large subunit | E0E99_22355 | Not Available | Positive | 4459953 - 4461620 | 60496.1 |
| propanediol/glycerol family dehydratase medium subunit | E0E99_22360 | Not Available | Positive | 4461632 - 4462216 | 21304.8 |
| diol dehydratase small subunit | E0E99_22365 | Not Available | Positive | 4462219 - 4462647 | 16133.2 |
| diol dehydratase reactivase subunit alpha | E0E99_22370 | Not Available | Positive | 4462658 - 4464469 | 63125.8 |
| duf1889 family protein | E0E99_22375 | Not Available | Positive | 4464583 - 4464906 | 11835.2 |
| type i secretion system outer membrane protein | E0E99_22380 | Not Available | Positive | 4465847 - 4467127 | 46425.5 |
| ig-like domain-containing protein | E0E99_22385 | Not Available | Positive | 4467256 - 4485303 | 606686.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

