Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large-conductance mechanosensitive channel protein mscl | E0E99_22115 | Not Available | Negative | 4424369 - 4424782 | 15040.8 |
| trk system potassium transporter trka | E0E99_22120 | Not Available | Negative | 4424924 - 4426300 | 50338.7 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | E0E99_22125 | Not Available | Negative | 4426322 - 4427611 | 48358.6 |
| methionyl-trna formyltransferase | E0E99_22130 | Not Available | Negative | 4427663 - 4428610 | 34122.4 |
| peptide deformylase | E0E99_22135 | Not Available | Negative | 4428625 - 4429134 | 19286.4 |
| dna-protecting protein dpra | E0E99_22140 | Not Available | Positive | 4429264 - 4430388 | 41207.6 |
| duf494 domain-containing protein | E0E99_22145 | Not Available | Positive | 4430360 - 4430833 | 18453.1 |
| hypothetical protein | E0E99_22150 | Not Available | Positive | 4430860 - 4431402 | 19973.2 |
| l-threonylcarbamoyladenylate synthase type 1 tsac | E0E99_22155 | Not Available | Positive | 4431407 - 4431979 | 20613.6 |
| shikimate dehydrogenase | E0E99_22160 | Not Available | Positive | 4431981 - 4432802 | 29394.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

