Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit secy | E0E99_22065 | Not Available | Positive | 4418704 - 4420035 | 48532.8 |
| 50s ribosomal protein l36 | E0E99_22070 | Not Available | Positive | 4420066 - 4420182 | 4364.59 |
| 30s ribosomal protein s13 | E0E99_22075 | Not Available | Positive | 4420329 - 4420685 | 13149.2 |
| 30s ribosomal protein s11 | E0E99_22080 | Not Available | Positive | 4420702 - 4421091 | 13845.7 |
| 30s ribosomal protein s4 | E0E99_22085 | Not Available | Positive | 4421125 - 4421745 | 23456.5 |
| dna-directed rna polymerase subunit alpha | E0E99_22090 | Not Available | Positive | 4421771 - 4422760 | 36499.9 |
| 50s ribosomal protein l17 | E0E99_22095 | Not Available | Positive | 4422801 - 4423184 | 14395.5 |
| duf1992 domain-containing protein | E0E99_22100 | Not Available | Positive | 4423292 - 4423660 | 13936.6 |
| zn(2+)-responsive transcriptional regulator | E0E99_22105 | Not Available | Positive | 4423671 - 4424096 | 16190.3 |
| alternative ribosome-rescue factor a | E0E99_22110 | Not Available | Positive | 4424154 - 4424372 | 8169.89 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

