Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator puur | E0E99_21915 | Not Available | Negative | 4400558 - 4401115 | 20007.8 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase | E0E99_21920 | Not Available | Negative | 4401141 - 4401905 | 27870.4 |
| glutamine synthetase | E0E99_21925 | Not Available | Positive | 4402118 - 4403536 | 53023.1 |
| apc family permease | E0E99_21930 | Not Available | Positive | 4403880 - 4405268 | 50625.6 |
| eal domain-containing protein | E0E99_21935 | Not Available | Negative | 4405441 - 4407620 | 82280.8 |
| elongation factor tu | E0E99_21940 | Not Available | Positive | 4407621 - 4407763 | 4884.19 |
| bacterioferritin-associated ferredoxin | E0E99_21945 | Not Available | Positive | 4407949 - 4408143 | 7473.22 |
| bacterioferritin | E0E99_21950 | Not Available | Positive | 4408215 - 4408691 | 18326.0 |
| prepilin peptidase | E0E99_21955 | Not Available | Negative | 4408688 - 4409155 | 17029.3 |
| 30s ribosomal protein s10 | E0E99_21960 | Not Available | Positive | 4409535 - 4409846 | 11767.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

