Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | E0E99_21810 | Not Available | Negative | 4378114 - 4378464 | 12881.6 |
| coa-disulfide reductase | E0E99_21815 | Not Available | Positive | 4378625 - 4380283 | 59601.7 |
| is3 family transposase | E0E99_21820 | Not Available | Negative | 4380387 - 4380559 | 6525.75 |
| pyridoxal phosphate-dependent aminotransferase | E0E99_21830 | Not Available | Negative | 4382070 - 4383251 | 44530.4 |
| na+/h+ antiporter nhac | E0E99_21835 | Not Available | Negative | 4383264 - 4384715 | 51175.0 |
| laci family dna-binding transcriptional regulator | E0E99_21840 | Not Available | Negative | 4384869 - 4385873 | 36938.8 |
| gnat family n-acetyltransferase | E0E99_21845 | Not Available | Negative | 4386041 - 4386490 | 17862.2 |
| plp-dependent aminotransferase family protein | E0E99_21850 | Not Available | Positive | 4386614 - 4388083 | 55117.2 |
| n-acetyltransferase | E0E99_21855 | Not Available | Positive | 4388276 - 4388989 | 27541.7 |
| cytochrome bd-ii oxidase subunit cbdx | E0E99_21860 | Not Available | Negative | 4389042 - 4389131 | 3533.51 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

