Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphopyruvate hydratase | E0E99_21745 | Not Available | Negative | 4368437 - 4369726 | 46788.4 |
| universal stress protein | E0E99_21750 | Not Available | Negative | 4369743 - 4370168 | 15833.1 |
| inorganic pyrophosphatase | E0E99_21755 | Not Available | Negative | 4370165 - 4371073 | 33024.1 |
| yeee/yede family protein | E0E99_21775 | Not Available | Positive | 4373680 - 4374108 | 14873.0 |
| yeee/yede family protein | E0E99_21780 | Not Available | Positive | 4374149 - 4374580 | 14994.1 |
| sulfite exporter taue/safe family protein | E0E99_21785 | Not Available | Positive | 4374617 - 4375414 | 27819.4 |
| duf134 domain-containing protein | E0E99_21790 | Not Available | Positive | 4375882 - 4376202 | 11989.5 |
| dinitrogenase iron-molybdenum cofactor | E0E99_21795 | Not Available | Positive | 4376177 - 4376638 | 16927.1 |
| paai family thioesterase | E0E99_21800 | Not Available | Positive | 4376826 - 4377221 | 14190.2 |
| dna starvation/stationary phase protection protein | E0E99_21805 | Not Available | Positive | 4377336 - 4377812 | 17945.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

