Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts fructose transporter subunit iib | E0E99_21540 | Not Available | Positive | 4331912 - 4332406 | 18502.3 |
| pts mannose/fructose/sorbose transporter subunit iic | E0E99_21545 | Not Available | Positive | 4332472 - 4333269 | 27949.0 |
| pts system mannose/fructose/sorbose family transporter subunit iid | E0E99_21550 | Not Available | Positive | 4333281 - 4334105 | 29407.8 |
| l-sorbose 1-phosphate reductase | E0E99_21555 | Not Available | Positive | 4334173 - 4335396 | 44831.2 |
| shikimate 5-dehydrogenase | E0E99_21560 | Not Available | Positive | 4335398 - 4336210 | 28816.7 |
| hypothetical protein | E0E99_21565 | Not Available | Negative | 4336262 - 4336618 | 12676.0 |
| hypothetical protein | E0E99_21570 | Not Available | Positive | 4336748 - 4336921 | 6736.12 |
| putative addiction module antidote protein | E0E99_21575 | Not Available | Positive | 4337325 - 4337603 | 9720.81 |
| xre family transcriptional regulator | E0E99_21580 | Not Available | Negative | 4337613 - 4337930 | 11523.2 |
| addiction module toxin rele | E0E99_21585 | Not Available | Negative | 4337920 - 4338279 | 13462.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

