Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine dehydratase subunit alpha family protein | E0E99_21490 | Not Available | Negative | 4322832 - 4324142 | 45317.7 |
| haaap family serine/threonine permease | E0E99_21495 | Not Available | Negative | 4324167 - 4325498 | 48432.9 |
| aaa family atpase | E0E99_21500 | Not Available | Positive | 4325685 - 4327271 | 59804.4 |
| xre family transcriptional regulator | E0E99_21505 | Not Available | Negative | 4327292 - 4327630 | 12546.3 |
| type ii toxin-antitoxin system rele/pare family toxin | E0E99_21510 | Not Available | Negative | 4327627 - 4327983 | 13848.7 |
| duf3811 domain-containing protein | E0E99_21515 | Not Available | Positive | 4328175 - 4328447 | 10486.7 |
| 23s rrna pseudouridine(2604) synthase rluf | E0E99_21520 | Not Available | Negative | 4328444 - 4329325 | 32782.8 |
| sugar-binding transcriptional regulator | E0E99_21525 | Not Available | Positive | 4329669 - 4330622 | 35230.1 |
| sdr family oxidoreductase | E0E99_21530 | Not Available | Positive | 4330689 - 4331495 | 29046.6 |
| pts sorbose transporter subunit iia | E0E99_21535 | Not Available | Positive | 4331505 - 4331912 | 14621.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

