Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf883 domain-containing protein | E0E99_21440 | Not Available | Positive | 4317006 - 4317311 | 11023.0 |
| hypothetical protein | E0E99_21445 | Not Available | Positive | 4317314 - 4317709 | 14570.4 |
| hypothetical protein | E0E99_21450 | Not Available | Positive | 4317709 - 4318008 | 11719.4 |
| doxx family protein | E0E99_21455 | Not Available | Positive | 4318089 - 4318574 | 17443.0 |
| glutathione s-transferase family protein | E0E99_21460 | Not Available | Positive | 4318646 - 4319632 | 37570.1 |
| hypothetical protein | E0E99_21465 | Not Available | Positive | 4319849 - 4320031 | 6921.55 |
| transcriptional regulator | E0E99_21470 | Not Available | Positive | 4320135 - 4320320 | 6452.82 |
| duf805 domain-containing protein | E0E99_21475 | Not Available | Positive | 4320496 - 4320861 | 14185.5 |
| lysr family transcriptional regulator | E0E99_21480 | Not Available | Negative | 4320899 - 4321795 | 33116.1 |
| pirin family protein | E0E99_21485 | Not Available | Positive | 4321900 - 4322601 | 25831.8 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

