Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylisocitrate lyase | E0E99_21340 | Not Available | Positive | 4291658 - 4292539 | 31725.1 |
| 2-methylcitrate synthase | E0E99_21345 | Not Available | Positive | 4292620 - 4293789 | 43190.6 |
| bifunctional 2-methylcitrate dehydratase/aconitate hydratase | E0E99_21350 | Not Available | Positive | 4293830 - 4295281 | 53829.7 |
| propionate--coa ligase | E0E99_21355 | Not Available | Positive | 4295322 - 4297208 | 69322.7 |
| hypothetical protein | E0E99_21360 | Not Available | Positive | 4297355 - 4298416 | 39798.2 |
| alpha-glucosidase | E0E99_21365 | Not Available | Positive | 4298432 - 4300783 | 88016.3 |
| nadph-dependent 2,4-dienoyl-coa reductase | E0E99_21370 | Not Available | Positive | 4301012 - 4303030 | 72891.8 |
| 23s rrna (guanine(1835)-n(2))-methyltransferase rlmg | E0E99_21375 | Not Available | Negative | 4303159 - 4304295 | 42125.5 |
| m48 family peptidase | E0E99_21380 | Not Available | Positive | 4304380 - 4304880 | 19299.5 |
| gfo/idh/moca family oxidoreductase | E0E99_21385 | Not Available | Positive | 4304953 - 4305951 | 36511.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

