Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase t | E0E99_21240 | Not Available | Positive | 4268602 - 4269858 | 45661.2 |
| c4-dicarboxylate abc transporter | E0E99_21245 | Not Available | Positive | 4269855 - 4271216 | 47668.4 |
| duf2913 family protein | E0E99_21250 | Not Available | Positive | 4271539 - 4272168 | 24618.8 |
| hypothetical protein | E0E99_21255 | Not Available | Positive | 4272265 - 4272501 | 8875.74 |
| lyse family translocator | E0E99_21260 | Not Available | Negative | 4272603 - 4273232 | 22469.3 |
| lysr family transcriptional regulator | E0E99_21265 | Not Available | Positive | 4273342 - 4274247 | 33487.3 |
| arac family transcriptional regulator | E0E99_21270 | Not Available | Positive | 4274372 - 4275355 | 36913.2 |
| ferrioxamine b receptor foxa | E0E99_21275 | Not Available | Positive | 4275477 - 4277585 | 78488.5 |
| hypothetical protein | E0E99_21280 | Not Available | Negative | 4277685 - 4278233 | 20947.9 |
| tonb-dependent siderophore receptor | E0E99_21285 | Not Available | Negative | 4278372 - 4280534 | 79155.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

