Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoadenosine phosphosulfate reductase | E0E99_20965 | Not Available | Positive | 4215082 - 4215816 | 28115.6 |
| aminopeptidase | E0E99_20970 | Not Available | Negative | 4215861 - 4216904 | 37730.9 |
| sulfate adenylyltransferase subunit cysd | E0E99_20975 | Not Available | Positive | 4217159 - 4218067 | 35155.2 |
| sulfate adenylyltransferase subunit cysn | E0E99_20980 | Not Available | Positive | 4218077 - 4219504 | 52381.4 |
| adenylyl-sulfate kinase | E0E99_20985 | Not Available | Positive | 4219504 - 4220109 | 22323.6 |
| duf3561 family protein | E0E99_20990 | Not Available | Positive | 4220157 - 4220480 | 11711.7 |
| cell division protein ftsb | E0E99_20995 | Not Available | Positive | 4220696 - 4221007 | 11594.7 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | E0E99_21000 | Not Available | Positive | 4221026 - 4221721 | 25130.1 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | E0E99_21005 | Not Available | Positive | 4221777 - 4222256 | 16867.6 |
| trna pseudouridine(13) synthase trud | E0E99_21010 | Not Available | Positive | 4222253 - 4223302 | 39271.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

