Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-containing alcohol dehydrogenase | E0E99_20915 | Not Available | Positive | 4205158 - 4206309 | 41183.4 |
| duf2474 domain-containing protein | E0E99_20920 | Not Available | Negative | 4206470 - 4206616 | 5462.1 |
| cytochrome d ubiquinol oxidase subunit ii | E0E99_20925 | Not Available | Negative | 4206642 - 4207637 | 36381.3 |
| pts glucose transporter subunit iib | E0E99_20930 | Not Available | Positive | 4207739 - 4209295 | 55759.8 |
| n-acetylmannosamine-6-phosphate 2-epimerase | E0E99_20935 | Not Available | Positive | 4209295 - 4209984 | 24242.5 |
| 7-carboxy-7-deazaguanine synthase quee | E0E99_20940 | Not Available | Positive | 4210056 - 4210727 | 25053.0 |
| 6-carboxytetrahydropterin synthase qued | E0E99_20945 | Not Available | Negative | 4210819 - 4211181 | 13672.5 |
| nadph-dependent assimilatory sulfite reductase flavoprotein subunit | E0E99_20950 | Not Available | Positive | 4211487 - 4213286 | 66160.3 |
| assimilatory sulfite reductase (nadph) hemoprotein subunit | E0E99_20955 | Not Available | Positive | 4213286 - 4214998 | 64067.0 |
| hypothetical protein | E0E99_20960 | Not Available | Negative | 4214955 - 4215137 | 6375.39 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

