Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen-iii c-methyltransferase | E0E99_20605 | Not Available | Negative | 4144297 - 4145670 | 50080.5 |
| nitrite transporter nirc | E0E99_20610 | Not Available | Negative | 4145686 - 4146495 | 28637.2 |
| hypothetical protein | E0E99_20615 | Not Available | Positive | 4146601 - 4146786 | 6908.6 |
| nitrite reductase small subunit nird | E0E99_20620 | Not Available | Negative | 4146694 - 4147020 | 12226.6 |
| nitrite reductase large subunit | E0E99_20625 | Not Available | Negative | 4147017 - 4149560 | 93250.8 |
| mfs transporter tsga | E0E99_20630 | Not Available | Negative | 4149867 - 4151048 | 43273.2 |
| peptidylprolyl isomerase a | E0E99_20635 | Not Available | Positive | 4151313 - 4151885 | 20317.3 |
| duf2559 family protein | E0E99_20640 | Not Available | Positive | 4151992 - 4152159 | 6683.02 |
| putative adenosine monophosphate-protein transferase fic | E0E99_20645 | Not Available | Positive | 4152149 - 4152751 | 22865.3 |
| aminodeoxychorismate synthase component 2 | E0E99_20650 | Not Available | Positive | 4152783 - 4153346 | 20752.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

