Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts lactose/cellobiose transporter subunit iia | E0E99_20555 | Not Available | Positive | 4131220 - 4131537 | 11602.1 |
| dna-directed rna polymerase subunit beta' | E0E99_20560 | Not Available | Negative | 4131649 - 4135872 | 155181.0 |
| dna-directed rna polymerase subunit beta | E0E99_20565 | Not Available | Negative | 4135949 - 4139977 | 150479.0 |
| 50s ribosomal protein l7/l12 | E0E99_20570 | Not Available | Negative | 4140298 - 4140663 | 12313.8 |
| 50s ribosomal protein l10 | E0E99_20575 | Not Available | Negative | 4140730 - 4141227 | 17801.7 |
| 50s ribosomal protein l1 | E0E99_20580 | Not Available | Negative | 4141642 - 4142349 | 24818.2 |
| 50s ribosomal protein l11 | E0E99_20585 | Not Available | Negative | 4142353 - 4142781 | 14910.3 |
| transcription termination/antitermination protein nusg | E0E99_20590 | Not Available | Negative | 4142935 - 4143480 | 20538.8 |
| preprotein translocase subunit sece | E0E99_20595 | Not Available | Negative | 4143482 - 4143865 | 13662.3 |
| elongation factor tu | E0E99_20600 | Not Available | Negative | 4144096 - 4144238 | 4884.19 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

