Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(+) diphosphatase | E0E99_20505 | Not Available | Negative | 4122402 - 4123175 | 29574.5 |
| rsd/algq family anti-sigma factor | E0E99_20510 | Not Available | Positive | 4123272 - 4123760 | 18641.5 |
| phosphomethylpyrimidine synthase thic | E0E99_20515 | Not Available | Positive | 4124118 - 4126016 | 70762.0 |
| thiamine phosphate synthase | E0E99_20520 | Not Available | Positive | 4126016 - 4126651 | 22899.4 |
| hesa/moeb/thif family protein | E0E99_20525 | Not Available | Positive | 4126644 - 4127402 | 27212.9 |
| sulfur carrier protein this | E0E99_20530 | Not Available | Positive | 4127383 - 4127583 | 7320.81 |
| thiazole synthase | E0E99_20535 | Not Available | Positive | 4127585 - 4128355 | 26760.7 |
| 2-iminoacetate synthase thih | E0E99_20540 | Not Available | Positive | 4128352 - 4129485 | 43409.8 |
| cold shock protein cspg | E0E99_20545 | Not Available | Negative | 4129605 - 4129817 | 7598.93 |
| pts sugar transporter subunit iib | E0E99_20550 | Not Available | Positive | 4130910 - 4131215 | 10912.8 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

