Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylamine--glycine ligase | E0E99_20455 | Not Available | Positive | 4114038 - 4115327 | 45831.6 |
| sigma-54-dependent response regulator transcription factor zrar | E0E99_20460 | Not Available | Negative | 4115324 - 4116649 | 48595.0 |
| two-component system sensor histidine kinase zras | E0E99_20465 | Not Available | Negative | 4116655 - 4118040 | 50809.4 |
| hypothetical protein | E0E99_20470 | Not Available | Positive | 4118098 - 4118286 | 7167.5 |
| zinc resistance sensor/chaperone zrap | E0E99_20475 | Not Available | Positive | 4118305 - 4118748 | 15713.7 |
| duf1481 domain-containing protein | E0E99_20480 | Not Available | Negative | 4118810 - 4119502 | 26226.7 |
| dna-binding protein hu-alpha | E0E99_20485 | Not Available | Negative | 4119514 - 4119786 | 9521.48 |
| duf416 family protein | E0E99_20490 | Not Available | Negative | 4119973 - 4120563 | 22675.0 |
| deoxyribonuclease v | E0E99_20495 | Not Available | Negative | 4120597 - 4121277 | 24845.3 |
| uroporphyrinogen decarboxylase | E0E99_20500 | Not Available | Negative | 4121287 - 4122351 | 39292.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

