Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galu regulator galf | E0E99_20405 | Not Available | Positive | 4103799 - 4104692 | 32809.2 |
| dtdp-glucose 4,6-dehydratase | E0E99_20410 | Not Available | Positive | 4105066 - 4106151 | 40445.6 |
| glucose-1-phosphate thymidylyltransferase | E0E99_20415 | Not Available | Positive | 4106151 - 4107020 | 31937.7 |
| wxcm-like domain-containing protein | E0E99_20420 | Not Available | Positive | 4107027 - 4107425 | 15250.4 |
| n-acetyltransferase | E0E99_20425 | Not Available | Positive | 4107415 - 4107948 | 21370.4 |
| degt/dnrj/eryc1/strs family aminotransferase | E0E99_20430 | Not Available | Positive | 4107952 - 4109058 | 41544.7 |
| o-antigen translocase | E0E99_20435 | Not Available | Positive | 4109046 - 4110326 | 47774.5 |
| glycosyltransferase family 2 protein | E0E99_20440 | Not Available | Positive | 4110328 - 4111317 | 37565.0 |
| glycosyltransferase family 2 protein | E0E99_20445 | Not Available | Positive | 4111322 - 4112049 | 27690.9 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | E0E99_20450 | Not Available | Positive | 4112433 - 4114022 | 57357.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

