Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gdp-mannose mannosyl hydrolase | E0E99_20355 | Not Available | Positive | 4090917 - 4091396 | 18231.4 |
| colanic acid biosynthesis glycosyltransferase wcai | E0E99_20360 | Not Available | Positive | 4091393 - 4092616 | 44949.9 |
| mannose-1-phosphate guanyltransferase | E0E99_20365 | Not Available | Positive | 4092619 - 4094055 | 53134.1 |
| phosphomannomutase cpsg | E0E99_20370 | Not Available | Positive | 4094192 - 4095562 | 50427.6 |
| undecaprenyl-phosphate glucose phosphotransferase | E0E99_20375 | Not Available | Positive | 4095617 - 4097011 | 52687.9 |
| mop flippase family protein | E0E99_20380 | Not Available | Positive | 4097013 - 4098491 | 53832.9 |
| colanic acid biosynthesis pyruvyl transferase wcak | E0E99_20385 | Not Available | Positive | 4098515 - 4099795 | 47742.9 |
| colanic acid biosynthesis glycosyltransferase wcal | E0E99_20390 | Not Available | Positive | 4099792 - 4101012 | 45121.1 |
| colanic acid biosynthesis protein wcam | E0E99_20395 | Not Available | Positive | 4101024 - 4102418 | 51217.8 |
| sdr family oxidoreductase | E0E99_20400 | Not Available | Positive | 4102566 - 4103561 | 37132.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

