Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| low molecular weight protein-tyrosine-phosphatase wzb | E0E99_20305 | Not Available | Positive | 4081070 - 4081519 | 16656.2 |
| tyrosine-protein kinase wzc | E0E99_20310 | Not Available | Positive | 4081516 - 4083672 | 78918.1 |
| colanic acid biosynthesis glycosyltransferase wcaa | E0E99_20315 | Not Available | Positive | 4083745 - 4084587 | 33151.6 |
| colanic acid biosynthesis acetyltransferase wcab | E0E99_20320 | Not Available | Positive | 4084590 - 4085078 | 17573.6 |
| colanic acid biosynthesis glycosyltransferase wcac | E0E99_20325 | Not Available | Positive | 4085075 - 4086292 | 44809.9 |
| putative colanic acid polymerase wcad | E0E99_20330 | Not Available | Positive | 4086267 - 4087484 | 45293.0 |
| colanic acid biosynthesis glycosyltransferase wcae | E0E99_20335 | Not Available | Positive | 4087490 - 4088236 | 27513.2 |
| colanic acid biosynthesis acetyltransferase wcaf | E0E99_20340 | Not Available | Positive | 4088246 - 4088800 | 20161.5 |
| gdp-mannose 4,6-dehydratase | E0E99_20345 | Not Available | Positive | 4088825 - 4089946 | 41985.1 |
| gdp-l-fucose synthase | E0E99_20350 | Not Available | Positive | 4089949 - 4090914 | 35989.1 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

