Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0E99_19945 | Not Available | Positive | 4014397 - 4014618 | 8314.88 |
| hypothetical protein | E0E99_19950 | Not Available | Positive | 4014646 - 4014906 | 9903.9 |
| hypothetical protein | E0E99_19955 | Not Available | Positive | 4014931 - 4015320 | 14733.7 |
| hypothetical protein | E0E99_19960 | Not Available | Positive | 4015342 - 4015863 | 19673.2 |
| hypothetical protein | E0E99_19965 | Not Available | Positive | 4016080 - 4016418 | 12719.3 |
| pilus assembly protein | E0E99_19970 | Not Available | Positive | 4016396 - 4017496 | 40206.6 |
| conjugal transfer protein | E0E99_19975 | Not Available | Positive | 4017493 - 4018935 | 51442.7 |
| conjugal transfer protein trag | E0E99_19980 | Not Available | Positive | 4018950 - 4022468 | 121835.0 |
| conjugal transfer mating pair stabilization protein tran | E0E99_19985 | Not Available | Positive | 4022904 - 4025561 | 95475.3 |
| hypothetical protein | E0E99_19990 | Not Available | Negative | 4025606 - 4026376 | 27256.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

