Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murr/rpir family transcriptional regulator | E0E99_19890 | Not Available | Negative | 4001037 - 4001885 | 30956.6 |
| n-acetylmuramic acid 6-phosphate etherase | E0E99_19895 | Not Available | Positive | 4002003 - 4002896 | 30723.3 |
| pts sugar transporter subunit iic | E0E99_19900 | Not Available | Positive | 4002906 - 4004270 | 47570.9 |
| phosphatidylglycerophosphatase c | E0E99_19905 | Not Available | Positive | 4004274 - 4004909 | 24311.6 |
| trna adenosine(34) deaminase tada | E0E99_19910 | Not Available | Positive | 4004927 - 4005463 | 19852.1 |
| membrane-bound lytic murein transglycosylase mltf | E0E99_19915 | Not Available | Negative | 4005476 - 4007026 | 58122.8 |
| phosphoribosylformylglycinamidine synthase | E0E99_19920 | Not Available | Positive | 4007283 - 4011170 | 141620.0 |
| hypothetical protein | E0E99_19930 | Not Available | Positive | 4013261 - 4013761 | 19265.7 |
| hypothetical protein | E0E99_19935 | Not Available | Positive | 4013817 - 4014125 | 12118.4 |
| hypothetical protein | E0E99_19940 | Not Available | Positive | 4014136 - 4014363 | 8563.23 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

