Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-e factor regulatory protein rseb | E0E99_19840 | Not Available | Positive | 3992376 - 3993332 | 35778.7 |
| soxr-reducing system protein rsec | E0E99_19845 | Not Available | Positive | 3993329 - 3993793 | 16147.8 |
| elongation factor 4 | E0E99_19850 | Not Available | Positive | 3994064 - 3995863 | 66622.2 |
| signal peptidase i | E0E99_19855 | Not Available | Positive | 3995879 - 3996853 | 35975.4 |
| ribonuclease iii | E0E99_19860 | Not Available | Positive | 3997123 - 3997803 | 25507.5 |
| gtpase era | E0E99_19865 | Not Available | Positive | 3997800 - 3998705 | 33798.9 |
| dna repair protein reco | E0E99_19870 | Not Available | Positive | 3998840 - 3999568 | 27216.8 |
| pyridoxine 5'-phosphate synthase | E0E99_19875 | Not Available | Positive | 3999580 - 4000311 | 26473.1 |
| holo-acp synthase | E0E99_19880 | Not Available | Positive | 4000311 - 4000691 | 14084.1 |
| yfhl family 4fe-4s dicluster ferredoxin | E0E99_19885 | Not Available | Negative | 4000721 - 4000981 | 9741.72 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

