Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil-dna glycosylase | E0E99_19790 | Not Available | Negative | 3983817 - 3984506 | 25581.6 |
| autonomous glycyl radical cofactor grca | E0E99_19795 | Not Available | Positive | 3984824 - 3985207 | 14253.9 |
| cysteine/o-acetylserine transporter | E0E99_19800 | Not Available | Negative | 3985287 - 3985874 | 21362.6 |
| lysr family transcriptional regulator | E0E99_19805 | Not Available | Positive | 3985977 - 3986873 | 33955.3 |
| atp-dependent rna helicase srmb | E0E99_19810 | Not Available | Negative | 3986891 - 3988219 | 49561.5 |
| trna(1)(val) (adenine(37)-n(6))-methyltransferase | E0E99_19815 | Not Available | Positive | 3988350 - 3989087 | 27392.7 |
| l-aspartate oxidase | E0E99_19820 | Not Available | Negative | 3989072 - 3990694 | 60180.7 |
| rpoe leader peptide rsed | E0E99_19825 | Not Available | Positive | 3990958 - 3991122 | 6372.01 |
| rna polymerase sigma factor rpoe | E0E99_19830 | Not Available | Positive | 3991119 - 3991694 | 21727.0 |
| anti-sigma-e factor rsea | E0E99_19835 | Not Available | Positive | 3991726 - 3992376 | 24214.8 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

