Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts glucitol/sorbitol transporter subunit iia | E0E99_19740 | Not Available | Negative | 3973010 - 3973372 | 12905.4 |
| pts glucitol/sorbitol transporter subunit iib | E0E99_19745 | Not Available | Negative | 3973386 - 3974357 | 33615.3 |
| pts glucitol/sorbitol transporter subunit iic | E0E99_19750 | Not Available | Negative | 3974354 - 3974917 | 20555.6 |
| mfs transporter | E0E99_19755 | Not Available | Positive | 3975479 - 3976777 | 46818.1 |
| yfim family lipoprotein | E0E99_19760 | Not Available | Negative | 3976774 - 3977097 | 11596.5 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | E0E99_19765 | Not Available | Negative | 3977142 - 3978497 | 52687.7 |
| protein lysine acetyltransferase | E0E99_19770 | Not Available | Negative | 3978612 - 3981272 | 97699.8 |
| dtw domain-containing protein | E0E99_19775 | Not Available | Negative | 3981309 - 3982007 | 25895.3 |
| thioredoxin trxc | E0E99_19780 | Not Available | Negative | 3982077 - 3982496 | 15532.6 |
| trna/rrna methyltransferase | E0E99_19785 | Not Available | Positive | 3982704 - 3983783 | 39318.4 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

