Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family dna-binding transcriptional regulator | E0E99_19680 | Not Available | Positive | 3960724 - 3961737 | 36692.2 |
| electron transport protein hydn | E0E99_19685 | Not Available | Positive | 3961883 - 3962428 | 19691.9 |
| carbamoyltransferase hypf | E0E99_19690 | Not Available | Positive | 3962572 - 3964812 | 81633.1 |
| nadh:flavorubredoxin reductase norw | E0E99_19695 | Not Available | Negative | 3964974 - 3966107 | 41196.8 |
| anaerobic nitric oxide reductase flavorubredoxin | E0E99_19710 | Not Available | Negative | 3966775 - 3968223 | 54232.1 |
| nitric oxide reductase transcriptional regulator norr | E0E99_19715 | Not Available | Positive | 3968412 - 3969932 | 55251.4 |
| arabinose-5-phosphate isomerase gutq | E0E99_19720 | Not Available | Negative | 3969929 - 3970894 | 34089.6 |
| dna-binding transcriptional repressor | E0E99_19725 | Not Available | Negative | 3970887 - 3971660 | 28189.8 |
| transcriptional regulator gutm | E0E99_19730 | Not Available | Negative | 3971798 - 3972157 | 12989.1 |
| sorbitol-6-phosphate dehydrogenase | E0E99_19735 | Not Available | Negative | 3972213 - 3972992 | 27819.4 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

