Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate hydrogenlyase subunit 3 | E0E99_19630 | Not Available | Positive | 3950426 - 3952252 | 63914.8 |
| hydrogenase 3 membrane subunit | E0E99_19635 | Not Available | Positive | 3952255 - 3953178 | 33007.4 |
| hydrogenase large subunit | E0E99_19640 | Not Available | Positive | 3953196 - 3954905 | 64997.3 |
| formate hydrogenlyase subunit hycf | E0E99_19645 | Not Available | Positive | 3954915 - 3955457 | 20364.4 |
| formate hydrogenlyase subunit hycg | E0E99_19650 | Not Available | Positive | 3955457 - 3956224 | 28040.8 |
| formate hydrogenlyase maturation protein hych | E0E99_19655 | Not Available | Positive | 3956221 - 3956631 | 15578.6 |
| hydrogenase maturation peptidase hyci | E0E99_19660 | Not Available | Positive | 3956624 - 3957094 | 17054.4 |
| type i toxin-antitoxin system syme family toxin | E0E99_19665 | Not Available | Negative | 3957151 - 3957390 | 8940.87 |
| 6-phospho-beta-glucosidase | E0E99_19670 | Not Available | Negative | 3957558 - 3958982 | 53708.6 |
| pts cellobiose/arbutin/salicin transporter subunit iibc | E0E99_19675 | Not Available | Negative | 3959005 - 3960459 | 50924.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

