Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna guanosine(34) transglycosylase tgt | E0E99_00710 | Not Available | Negative | 142276 - 143403 | 42540.0 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | E0E99_00715 | Not Available | Negative | 143459 - 144529 | 39430.1 |
| acp phosphodiesterase | E0E99_00720 | Not Available | Positive | 144620 - 145201 | 23204.5 |
| peroxiredoxin | E0E99_00725 | Not Available | Positive | 145370 - 145972 | 22264.5 |
| amidohydrolase | E0E99_00730 | Not Available | Negative | 146094 - 147962 | 69198.6 |
| antibiotic biosynthesis monooxygenase | E0E99_00735 | Not Available | Negative | 147984 - 148529 | 20734.6 |
| hydrolase | E0E99_00740 | Not Available | Negative | 148703 - 149344 | 23792.4 |
| lysr family transcriptional regulator | E0E99_00745 | Not Available | Positive | 149618 - 150520 | 33412.2 |
| maltodextrin glucosidase | E0E99_00750 | Not Available | Negative | 150514 - 152331 | 68818.9 |
| proline-specific permease proy | E0E99_00755 | Not Available | Negative | 152470 - 153843 | 50212.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

