Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2158 domain-containing protein | E0E99_19530 | Not Available | Negative | 3932953 - 3933138 | 6890.17 |
| duf808 domain-containing protein | E0E99_19535 | Not Available | Negative | 3933216 - 3934127 | 32156.4 |
| drug/metabolite exporter yeda | E0E99_19540 | Not Available | Positive | 3934306 - 3935226 | 32432.1 |
| very short patch repair endonuclease | E0E99_19545 | Not Available | Negative | 3935218 - 3935685 | 17808.3 |
| dna cytosine methyltransferase | E0E99_19550 | Not Available | Negative | 3935666 - 3937096 | 54340.6 |
| phosphohydrolase | E0E99_19555 | Not Available | Negative | 3937173 - 3937865 | 26088.1 |
| iron/manganese abc transporter permease subunit sitd | E0E99_19560 | Not Available | Negative | 3938509 - 3939360 | 30545.7 |
| iron/manganese abc transporter permease subunit sitc | E0E99_19565 | Not Available | Negative | 3939357 - 3940214 | 30915.9 |
| iron/manganese abc transporter atp-binding protein sitb | E0E99_19570 | Not Available | Negative | 3940217 - 3941032 | 29732.8 |
| metal abc transporter substrate-binding protein | E0E99_19575 | Not Available | Negative | 3941029 - 3941946 | 33390.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

